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Previous Versions

Xenium Explorer 1.2.0 (Aug 17, 2023)

Download is unavailable on mobile devices.

Xenium Explorer 1.2.0 highlights

  • Align and explore an H&E image from the same section directly on the Xenium data.
  • Import a CSV file and view clustering results from community-developed tools.
  • Use the lasso tool to export Cell IDs for further analysis in community-developed tools.
  • Streamline files for Xenium Explorer visualization - Z-stack morphology.ome.tif image is now optional.
Release Notes

Xenium Explorer 1.1.0 (Apr 3, 2023)

Download is unavailable on mobile devices.

Xenium Explorer 1.1.0 highlights

  • Explore Xenium image-based in situ data with intuitive controls.
  • Organize markers of interest and visualize 3D localized transcripts at any scale.
  • Examine segmented cells colored by transcript density or clustering result.
  • Compare gene expression profiles and cell type proportions across tissue regions with a versatile lasso tool.
  • New: Save imported gene groups across sessions with Saved Views.
  • New: Compatible with all Xenium Onboard Analysis versions, but required for v1.3+.

Xenium Explorer 1.0.0 (Dec 7, 2022)

Download is unavailable on mobile devices.

Xenium Explorer 1.0.0 highlights

  • Initial release of Xenium Explorer!
  • Explore Xenium image-based in situ data with intuitive controls.
  • Organize markers of interest and visualize 3D localized transcripts at any scale.
  • Examine segmented cells colored by transcript density or clustering result.
  • Compare gene expression profiles and cell type proportions across tissue regions with a versatile lasso tool.