Everyday de novo Assembly

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The Chromium de novo Assembly Solution

True Diploid Assembly with the Supernova Assembler

Discover the true genome with the Supernova Assembler and open the door to low-cost, everyday
diploid assemblies. Unlock sample-specific sequences, probe diploid genome structure
and remove the need for a reference sequence of any kind.

Our Solution Features

  • True diploid assembly unlike other methods
  • Fast and simple de novo assembly workflow
  • Go from sample to assembly in <2 weeks
  • 10 Mb scaffold size and long range accuracy
  • High-quality assembly from as little as 1 ng of DNA
  • Validated and supported for human genomes*
View the Workflow

*Note on non-human samples: Supernova is a de novo assembly program that has been designed to assemble germline human genomes, from data generated using Chromium Genome Reagent Kits. 10x Genomics has validated Chromium Genome Reagent Kits and Supernova only on human genomes. Therefore, using Supernova to assemble non-human genomes is experimental and may have unexpected features that limit assembly quality. Despite this, many users have successfully assembled non-human genomes using Supernova.


The Chromium Controller

Compact, Sleek, Efficient.

The compact, sleek Chromium Controller has been designed to rapidly and efficiently automate the equivalent of 100,000s to 1,000,000s of pipetting steps for highly parallel sample partitioning and molecular barcoding. The Chromium Controller allows a user to run any of our Chromium Single Cell Gene Expression, Single Cell Immune Profiling, Genome Sequencing and Exome Sequencing Solutions. A dedicated Chromium Single Cell Controller is also available for users that exclusively run our Chromium Single Cell Gene Expression and Single Cell Immune Profiling Solutions.

View Our Controller Gallery

Product List

Chromium de novo Assembly Solution

Product Name Product Code
Chromium Genome HT Library & Gel Bead Kit v2, 96 rxns 120261
Chromium Genome Library Kit & Gel Bead Kit v2, 16 rxns 120258
Chromium Genome Chip Kit v2, 48 rxns 120257
Chromium i7 Multiplex Kit, 96 rxns 120262
Chromium Controller & Accessory Kit, 24 Mo. Warranty 120246
Chromium Controller & Accessory Kit, 12 Mo. Warranty 120223
The Supernova Assembler Download Here
Scientific Seminars

de novo assembly of a large size genome: the olive fruit fly

February 14, 2017
AGBT Annual Meeting - Hollywood, FL
Poster Hall

Assembly of individual chromosomes at megabase scale using 10x Linked-Reads

  • Genome Informatics
    Cold Spring Harbor Laboratory, New York
    November 1 - November 4, 2017

Direct determination of genome sequences

  • Wellcome Trust Genome Informatics Conference
    Cambridge, UK
    September 19 - 22, 2016
  • The Biology of Genomes
    Cold Spring Harbor, NY
    May 10 - 14, 2016

Order your Chromium Controller, today.

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