Introduction

Assay analysis

Getting Started

Getting Started with Loupe Browser

Loupe Browser is a powerful visualization software that provides intuitive analysis functionality you need to explore your 10x Genomics data.

Overview

Download Center

Tutorials

Loupe V(D)J Browser Tutorials

Release Notes

Datasets

Analysis Guides

Loupe Browser

Learn about Loupe Browser and get oriented with the Loupe Browser interface and features.

Navigation for Single Cell

Navigation for Spatial

10x Genomics’ LoupeR is an R package that works with Seurat objects to create a Loupe Browser file.

LoupeR

Learn about product specific analysis capabilities to quickly gain insights into the underlying biology.

Assay Analysis

Single Cell Gene Expression & Flex

Single Cell Immune Profiling

Single Cell ATAC

Single Cell Multiome ATAC + Gene Expression

Spatial Gene Expression

Loupe Browser is a powerful visualization software that provides intuitive analysis functionality you need to explore your 10x Genomics data. You can also analyze your Seurat processed data in Loupe by converting your Seurat objects into Loupe Browser files using the LoupeR package.

What is Loupe Browser?

View the latest updates to Loupe Browser.

Browse Q&As from the 10x Genomics support team.

Access free, publicly available data from 10x Genomics.

A collection of introductions, tutorials, and blogs for data analysis beyond software.