Publications

Show Only Featured Publications (185)

2397 RESULTS

G3 : Genes, Genomes, Genetics, Feb 2021Margarida Gonçalves et al.
De novo whole-genome assembly and resequencing resources for the roan (Hippotragus equinus), an iconic African antelope
Linked-Reads Genomics
DOI: 10.1093/g3journal/jkab002PubMed: 33604669
- AREA OF INTEREST
  Genome Assembly
- SPECIES
  Other - Mammal
Cell, Feb 2021Nathan D Mathewson et al.
Inhibitory CD161 receptor identified in glioma-infiltrating T cells by single-cell analysis
Single Cell Immune Profiling
DOI: 10.1016/j.cell.2021.01.022PubMed: 33592174
- AREA OF INTEREST
  Cancer Research
- SPECIES
  Human
- SAMPLE TYPES
  Cells from Brain, Tumor - solid
Plant cell, The, Mar 2019undefined undefined et al.
Dynamics of Gene Expression in Single Root Cells of Arabidopsis thaliana
Single Cell Gene Expression
DOI: 10.1105/tpc.18.00785PubMed: 33590229
- AREA OF INTEREST
  Cell Biology, Developmental Biology
- SPECIES
  Arabidopsis, Plant
- SAMPLE TYPES
  Protoplast from Plant
Nature Neuroscience, Feb 2021Jacob A Blum et al.
Single-cell transcriptomic analysis of the adult mouse spinal cord reveals molecular diversity of autonomic and skeletal motor neurons
Single Cell Gene Expression
DOI: 10.1038/s41593-020-00795-0PubMed: 33589834
- AREA OF INTEREST
  Cell Atlas, Neuroscience
- SPECIES
  Mouse
- SAMPLE TYPES
  Nuclei from Spinal cord
Cell Biology and Toxicology, Feb 2021Yulong Tang et al.
Advanced single-cell pooled CRISPR screening identifies C19orf53 required for cell proliferation based on mTORC1 regulators
Single Cell Gene Expression
DOI: 10.1007/s10565-021-09586-0PubMed: 33586084
- AREA OF INTEREST
  Cell Biology
- SPECIES
  Human
npj Genomic Medicine, Feb 2020undefined undefined et al.
Single-cell sperm transcriptomes and variants from fathers of children with and without autism spectrum disorder
Single Cell Gene Expression
DOI: 10.1038/s41525-020-0117-4PubMed: 33579997
- AREA OF INTEREST
  Neuroscience
- SPECIES
  Human
- SAMPLE TYPES
  Cells from Testis
PLoS One, Feb 2021Rohit Gaurav et al.
High-throughput analysis of lung immune cells in a combined murine model of agriculture dust-triggered airway inflammation with rheumatoid arthritis
Single Cell Gene Expression
DOI: 10.1371/journal.pone.0240707PubMed: 33577605
- AREA OF INTEREST
  Immunology
- SPECIES
  Mouse
- SAMPLE TYPES
  Cells from Lung
Human Molecular Genetics, Feb 2021Zheng-Hui Zhao et al.
Single cell RNA sequencing reveals species-specific time spans of cell cycle transitions in early oogenesis
Single Cell Gene Expression
DOI: 10.1093/hmg/ddab048PubMed: 33575778
- AREA OF INTEREST
  Developmental Biology
- SPECIES
  Mouse, Primate
- SAMPLE TYPES
  Cells from Reproductive organ
Nature Immunology, Feb 2021Chen Yao et al.
BACH2 enforces the transcriptional and epigenetic programs of stem-like CD8+ T cells
Single Cell Gene Expression
DOI: 10.1038/s41590-021-00868-7PubMed: 33574619
- AREA OF INTEREST
  Immunology
- SPECIES
  Mouse
- SAMPLE TYPES
  Cells from Spleen
Nature Immunology, Feb 2021Jang Hyun Park et al.
Tumor hypoxia represses γδ T cell-mediated antitumor immunity against brain tumors
Single Cell Gene Expression
DOI: 10.1038/s41590-020-00860-7PubMed: 33574616
- AREA OF INTEREST
  Immuno-oncology
- SPECIES
  Mouse
- SAMPLE TYPES
  Cells from Brain, Tumor - solid
Science, Feb 2021Cleber A Trujillo et al.
Reintroduction of the archaic variant of NOVA1 in cortical organoids alters neurodevelopment
Single Cell Gene Expression
DOI: 10.1126/science.aax2537PubMed: 33574182
- AREA OF INTEREST
  Developmental Biology, Neuroscience
- SPECIES
  Human
- SAMPLE TYPES
  Nuclei from Organoid
PLoS Pathogens, Feb 2021Michael Mor et al.
Multi-clonal SARS-CoV-2 neutralization by antibodies isolated from severe COVID-19 convalescent donors
Single Cell Immune Profiling
DOI: 10.1371/journal.ppat.1009165PubMed: 33571304
- AREA OF INTEREST
  Infectious Disease
- SPECIES
  Human
- SAMPLE TYPES
  Cells from Blood
Science Advances, Jan 2021Juan Pablo Lopez et al.
Single-cell molecular profiling of all three components of the HPA axis reveals adrenal ABCB1 as a regulator of stress adaptation
Single Cell Gene Expression
DOI: 10.1126/sciadv.abe4497PubMed: 33571131
- AREA OF INTEREST
  Neuroscience
- SPECIES
  Mouse
- SAMPLE TYPES
  Cells from Brain, Gland
Science Advances, Jan 2021Xudong Xing et al.
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing
Single Cell Gene Expression
DOI: 10.1126/sciadv.abd9738PubMed: 33571124
- AREA OF INTEREST
  Cancer Research
- SPECIES
  Human
- SAMPLE TYPES
  Cells from Lung, Tumor - solid
Bioinformatics, Sep 2019undefined undefined et al.
QUBIC2: a novel and robust biclustering algorithm for analyses and interpretation of large-scale RNA-Seq data
Single Cell Gene Expression
DOI: 10.1093/bioinformatics/btz692PubMed: 33570128
- AREA OF INTEREST
  Computational Method
- SPECIES
  Human
- SAMPLE TYPES
  Cells from Blood
Endocrinology, Dec 2020Melody Allensworth-James et al.
Control of the Anterior Pituitary Cell Lineage Regulator POU1F1 by the Stem Cell Determinant Musashi
Single Cell Gene Expression
DOI: 10.1210/endocr/bqaa245PubMed: 33570120
- AREA OF INTEREST
  Developmental Biology
- SPECIES
  Mouse
- SAMPLE TYPES
  Cells from Gland
Nature, Feb 2021Lila Allou et al.
Non-coding deletions identify Maenli lncRNA as a limb-specific En1 regulator
Single Cell Gene Expression
DOI: 10.1038/s41586-021-03208-9PubMed: 33568816
- AREA OF INTEREST
  Genetic Health
- SPECIES
  Mouse
- SAMPLE TYPES
  Cells from Embryonic
Cell Reports, Feb 2021Henry J Sutton et al.
Atypical B cells are part of an alternative lineage of B cells that participates in responses to vaccination and infection in humans
Single Cell Immune Profiling
DOI: 10.1016/j.celrep.2020.108684PubMed: 33567273
- AREA OF INTEREST
  Infectious Disease
- SPECIES
  Human
- SAMPLE TYPES
  Cells from Blood
Molecular Psychiatry, Feb 2021Umer Javed Butt et al.
Hippocampal neurons respond to brain activity with functional hypoxia
Single Cell Gene Expression
DOI: 10.1038/s41380-020-00988-wPubMed: 33564132
- AREA OF INTEREST
  Neuroscience
- SPECIES
  Mouse
- SAMPLE TYPES
  Cells from Brain
Cell Stem Cell, Feb 2021Keane Jared Guillaume Kenswil et al.
Endothelium-derived stromal cells contribute to hematopoietic bone marrow niche formation
Single Cell Gene Expression
DOI: 10.1016/j.stem.2021.01.006PubMed: 33561425
- AREA OF INTEREST
  Developmental Biology
- SPECIES
  Mouse
- SAMPLE TYPES
  Cells from Bone Marrow

Publications

AREA OF INTEREST

SPECIES

TISSUE TYPE

JOURNAL

10X GENOMICS PRODUCT

De novo whole-genome assembly and resequencing resources for the roan (Hippotragus equinus), an iconic African antelope

Inhibitory CD161 receptor identified in glioma-infiltrating T cells by single-cell analysis

Dynamics of Gene Expression in Single Root Cells of Arabidopsis thaliana

Single-cell transcriptomic analysis of the adult mouse spinal cord reveals molecular diversity of autonomic and skeletal motor neurons

Advanced single-cell pooled CRISPR screening identifies C19orf53 required for cell proliferation based on mTORC1 regulators

Single-cell sperm transcriptomes and variants from fathers of children with and without autism spectrum disorder

High-throughput analysis of lung immune cells in a combined murine model of agriculture dust-triggered airway inflammation with rheumatoid arthritis

Single cell RNA sequencing reveals species-specific time spans of cell cycle transitions in early oogenesis

BACH2 enforces the transcriptional and epigenetic programs of stem-like CD8+ T cells

Tumor hypoxia represses γδ T cell-mediated antitumor immunity against brain tumors

Reintroduction of the archaic variant of NOVA1 in cortical organoids alters neurodevelopment

Multi-clonal SARS-CoV-2 neutralization by antibodies isolated from severe COVID-19 convalescent donors

Single-cell molecular profiling of all three components of the HPA axis reveals adrenal ABCB1 as a regulator of stress adaptation

Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing

QUBIC2: a novel and robust biclustering algorithm for analyses and interpretation of large-scale RNA-Seq data

Control of the Anterior Pituitary Cell Lineage Regulator POU1F1 by the Stem Cell Determinant Musashi

Non-coding deletions identify Maenli lncRNA as a limb-specific En1 regulator

Atypical B cells are part of an alternative lineage of B cells that participates in responses to vaccination and infection in humans

Hippocampal neurons respond to brain activity with functional hypoxia

Endothelium-derived stromal cells contribute to hematopoietic bone marrow niche formation