Cell Ranger v7.2 is the last version to support the analysis of LT (low throughput) libraries
- Single Cell Gene Expression3' gene expression profiling at scale with single cell resolution.
- Single Cell Immune Profiling5' gene expression alongside V(D)J repertoire profiling and antigen specificity of T and B cells.
- Single Cell Gene Expression FlexFixed RNA Profiling assay for comprehensive probe-based gene expression profiling with single cell resolution.
- Single Cell Multiome ATAC + Gene ExpressionCombined profiling of 3' gene expression and chromatin accessibility from the same cell.
- Single Cell ATACChromatin accessibilility profiling at the single cell level.
- Spatial Gene Expression for FFPEProbe-based assay allowing simultaneous analysis of molecular and imaging data from FFPE tissue sections.
- Spatial Gene Expression for Fresh FrozenPoly-A based assay allowing simultaneous analysis of molecular and imaging data from fresh frozen tissue sections.
- CytAssist Spatial Gene ExpressionProbe-based assay allowing simultaneous analysis of molecular and imaging data from FFPE, Fresh Frozen, and Fixed Frozen tissue sections.
- CytAssist Spatial Gene and Protein ExpressionSimultaneous analysis of RNA and protein expression of FFPE tissues, using probe-based chemistry and tagged antibodies.
- Cloud AnalysisAnalyze 10x Genomics data quickly and securely in the cloud.
- Cell RangerAnalyze single cell gene expression data with a set of free, easy-to-use analysis pipelines.
- Cell Ranger ATACAnalyze Single Cell ATAC data for identification of open chromatin regions, motif annotation, and differential accessibility analysis.
- Cell Ranger ARCAnalyze Single Cell Multiome ATAC + Gene Expression data with a set of free, easy-to-use pipelines for primary and secondary analyses.
- Space RangerAnalyze your Visium Spatial Gene Expression data with brightfield and fluorescence microscope images.
- Loupe BrowserExplore 10x Genomics data with our powerful visualization software. Compatible with single cell and spatial products.
- Loupe V(D)J BrowserInvestigate clonotypes and examine V(D)J transcripts in Single Cell Immune Profiling data with this interactive visualization tool.
- Xenium ExplorerExplore Xenium In Situ data from the tissue scale down to subcellular resolution with our interactive visualization tool.
- Xenium RangerAnalyze Xenium In Situ Gene Expression data with a set of easy-to-use analysis pipelines.
- Xenium Onboard AnalysisDetails about the algorithms and output files generated by the Xenium Onboard Analysis pipeline.