Important Workflow Update for Next GEM Chip & Gasket AssemblyLearn more
Cell Ranger v7.2 is the last version to support the analysis of LT (low throughput) libraries
Products
Chromium
- Single Cell Gene Expression3' gene expression profiling at scale with single cell resolution.
- Single Cell Immune Profiling5' gene expression alongside V(D)J repertoire profiling and antigen specificity of T and B cells.
- Single Cell Gene Expression FlexFixed RNA Profiling assay for comprehensive probe-based gene expression profiling with single cell resolution.
- Single Cell Multiome ATAC + Gene ExpressionCombined profiling of 3' gene expression and chromatin accessibility from the same cell.
- Single Cell ATACChromatin accessibilility profiling at the single cell level.
Visium
- Spatial Gene Expression for FFPEProbe-based assay allowing simultaneous analysis of molecular and imaging data from FFPE & frozen tissue sections.
- Spatial Gene Expression for Fresh FrozenPoly-A based assay allowing simultaneous analysis of molecular and imaging data from fresh frozen tissue sections.
- Spatial Gene and Protein ExpressionCytAssist-enabled simultaneous analysis of RNA and protein expression of FFPE tissues, using probe-based chemistry and tagged antibodies.
Chromium (discontinued)
Linked-reads (discontinued)
Instruments
Chromium
Software
Cloud AnalysisAnalyze 10x Genomics data quickly and securely in the cloud.
Cell RangerAnalyze single cell gene expression data with a set of free, easy-to-use analysis pipelines.
Cell Ranger ATACAnalyze Single Cell ATAC data for identification of open chromatin regions, motif annotation, and differential accessibility analysis.- Cell Ranger ARCAnalyze Single Cell Multiome ATAC + Gene Expression data with a set of free, easy-to-use pipelines for primary and secondary analyses.
Space RangerAnalyze your Visium Spatial Gene Expression data with brightfield and fluorescence microscope images.
Loupe BrowserExplore 10x Genomics data with our powerful visualization software. Compatible with single cell and spatial products.
Loupe V(D)J BrowserInvestigate clonotypes and examine V(D)J transcripts in Single Cell Immune Profiling data with this interactive visualization tool.
Xenium ExplorerExplore Xenium In Situ data from the tissue scale down to subcellular resolution with our interactive visualization tool.
Xenium RangerAnalyze Xenium In Situ Gene Expression data with a set of easy-to-use analysis pipelines.