5k Peripheral Blood Mononuclear Cells (PBMCs) from a Healthy Donor

Epi ATAC dataset analyzed using Cell Ranger ATAC 1.1.0

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Number of samples on this datasets page1

Peripheral blood mononuclear cells (PBMCs) from a healthy donor.

~6,700 transposed nuclei were loaded.
5,205 nuclei were recovered.
Sequenced on Illumina NovaSeq with approximately 41k read pairs per cell.
- 50 bp Read 1
- 8 bp i7 index (sample index)
- 16 bp i5 (10x Barcode)
- 49 bp Read 2

This dataset is licensed under the Creative Commons Attribution 4.0 International (CC BY 4.0) license. 10x citation guidelines available here.

Product

Epi ATAC

Software

Cell Ranger ATAC

Subpipeline

cellranger-atac count

10x Instrument(s)

Chromium Controller

Species

Human

Anatomical Entity

Blood

Disease State

healthy

Cells or Nuclei

Nuclei

Selected Cell Types

PBMCs

Biomaterial Type

Cell Suspension

Cell/Nuclei Count

5,205

Donor Count

Date Published

2019-04-16