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Aggregate of t_3k and t_4k

Universal 3' dataset analyzed using Cell Ranger 1.2.0

Number of samples on this datasets page1

Aggregate of t_3k and t_4k pan T cells isolated from mononuclear cells of a healthy donor.

  • 8,067 cells detected
  • Cell Ranger commands used to produce this aggregated dataset:

cellranger count --id=t_3k --fastqs=t_3k/fastqs --transcriptome=refdata-cellranger-GRCh38-1.2.0/ --cells=6000 cellranger count --id=t_4k --fastqs=t_4k/fastqs --transcriptome=refdata-cellranger-GRCh38-1.2.0/ --cells=6000 cellranger aggr --id=t_3k_4k_aggregate --csv=t_3k_4k_aggregate.csv

This dataset is licensed under the Creative Commons Attribution 4.0 International (CC BY 4.0) license. 10x citation guidelines available here.

Product

Universal 3'

Software

Cell Ranger

Subpipeline

cellranger count, cellranger aggr

10x Instrument(s)

Chromium Controller

Species

Human

Anatomical Entity

Blood

Disease State

healthy

Cells or Nuclei

Cells

Selected Cell Types

Pan T Cells

Biomaterial Type

Cell Suspension

Cell/Nuclei Count

8,067

Donor Count

1

Date Published

2017-02-09