All datasets

INSECT: One moth collected in a garden

De Novo Assembly dataset analyzed using Supernova 2.0.0

Number of samples on this datasets page1

One moth collected in a garden in Pleasanton, CA, USA. Salting out protocol used for DNA extraction.

  • Sequencer: NovaSeq
  • Input mass: 0.6 ng
  • Number of reads: 75.00 M
  • Genome size (estimated): 199 M
  • Raw coverage: 56.4 x
  • Inferred molecule length: 20 Kb
  • N50 Contig Length: 63.2 Kb
  • N50 Phase Block: 684 Kb
  • N50 Scaffold Length: 686 Kb
  • Analysis run with --maxreads=75000000

This dataset is licensed under the Creative Commons Attribution 4.0 International (CC BY 4.0) license. 10x citation guidelines available here.

Product

De Novo Assembly

Software

Supernova

Subpipeline

supernova run

10x Instrument(s)

Chromium Controller

Species

Lepidoptera

Biomaterial Type

Specimen from Organism

Donor Count

1

Date Published

2018-01-16