Integrated GEX and VDJ analysis of Connect generated library from human melanoma
Single Cell Immune Profiling dataset analyzed using Cell Ranger 6.0.1
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Dataset overview
Output and supplemental files
Input files
Learn about Chromium analysis
Dissociated tumor cells from a primary human melanoma sample were purchased from Discovery Life Sciences. Gene Expression, TCR and BCR libraries were generated from a single channel of Chromium Connect. Libraries were prepared following the Chromium Next GEM Automated Single Cell 5' Reagent Kits v2 User Guide (CG000384).
- 5,000 cells targeted
- 4,680 cells detected
- 30,038 median reads per cell
- Sequenced on Illumina NovaSeq with 90 bp read 1, 90 bp read 2, 10 bp i5 sample barcode, and 10 bp i7 sample barcode
- Run with Cell Ranger 6.0.1
This dataset is licensed under the Creative Commons Attribution license.