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HCC1954 Tumor Whole Genome

Genome & Exome dataset analyzed using Long Ranger 2.0.0

Number of samples on this datasets page1

Sample Name: HCC1954 (Cell line derived from a primary stage IIA, grade 3 invasive ductal carcinoma) - Details

  • Sequencing volume: 128 Gb
  • Sequencer: Illumina X Ten
  • Input mass: 1.25 ng
  • Inferred molecule length: 84 Kb
  • N50 Phase Block: 5 Mb
  • Longest Phase Block: 33 Mb

This dataset is licensed under the Creative Commons Attribution 4.0 International (CC BY 4.0) license. 10x citation guidelines available here.

Product

Genome & Exome

Software

Long Ranger

Subpipeline

longranger wgs

10x Instrument(s)

Chromium Controller

Species

Human

Anatomical Entity

Breast

Preservation Method

Frozen

Disease State

invasive ductal carcinoma

Selected Cell Types

epithelial

Biomaterial Type

Cell Line

Donor Count

1

Date Published

2016-05-11