4k PBMCs from a Healthy Donor
Single Cell Gene Expression dataset analyzed using Cell Ranger 2.1.0
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Dataset overview
Output and supplemental files
Input files
Learn about Chromium analysis
Peripheral blood mononuclear cells (PBMCs) from a healthy donor (same donor as pbmc8k). PBMCs are primary cells with relatively small amounts of RNA (~1pg RNA/cell).
- 4,340 cells detected
- Sequenced on Illumina Hiseq4000 with approximately 87,000 reads per cell
- 26bp read1 (16bp Chromium barcode and 10bp UMI), 98bp read2 (transcript), and 8bp I7 sample barcode
- Analysis run with --expect-cells=5000
This dataset is licensed under the Creative Commons Attribution license.