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COLO829 G1 sorted 1475 cells

Single Cell CNV dataset analyzed using Cell Ranger DNA 1.0.0

Number of samples on this datasets page1

Overview: G1 sorted cells from COLO829, a melanoma cell line obtained from American Type Culture Collection (ATCC).

  • Num Cells: 1475
  • Total Sequencing Reads: 3.04B
  • Median Effective Reads per Mb: 436
  • Sequencer: Novaseq
  • Read Construct: 100 (R1), 8 (i7), 100 (R2)
  • Pipeline: Cell Ranger DNA v1.0.0

This dataset is licensed under the Creative Commons Attribution 4.0 International (CC BY 4.0) license. 10x citation guidelines available here.

Product

Single Cell CNV

Software

Cell Ranger DNA

Subpipeline

cellranger-dna cnv

10x Instrument(s)

Chromium Controller

Species

Human

Anatomical Entity

Skin

Disease State

melanoma

Cells or Nuclei

Cells

Biomaterial Type

Cell Line

Cell/Nuclei Count

1,475

Donor Count

1

Date Published

2019-08-30