Refer to instrument-specific documents for seamless instrument operation.

Instruments

Chromium Epi ATAC (Assay for Transposase Accessible Chromatin) analyzes thousands of unique open chromatin fragments genome-wide with single cell resolution.

10x PAE Services are designed to help you automate your workflows with confidence.

Premium Automation Enablement (PAE)

Additional Applications

Find resources from protocols to free-to-use analysis tools.

Epi ATAC

Chromium X Series

Advanced system for multiomic analysis of hundreds to millions of cells.

Chromium

Gene Expression

Chromatin accessibilility profiling at the single cell level.

Plan ahead by referring to the list of equipment, kits, and reagents needed for Single Cell ATAC.

Experimental Design

Experimental Design & Planning

Prepare optimal single cell/nuclei suspension by following our Demonstrated Protocols.

Sample Prep

Construct a sequencing-ready single cell library by following our step-by-step User Guide / Protocol.

Library Construction

Sequence your single cell library as per our provided recommendations.

Sequencing

Analyze your single cell data using our pipelines, visualization, and Cloud Analysis tools.

Software Analysis

Workflow Documentation

Epigenomic Profiling

Immune Profiling

Protein co-detection

Overview

User Guides

Datasets

Videos

Publications

What is Epi ATAC?

Access free, publicly available data from a number of different sample types generated with Chromium single cell solutions.

Explore how-to videos and training modules.

Chromium Next GEM Epi ATAC v2

Chromium Next GEM Epi ATAC v1.1

Chromium Next GEM Epi ATAC

Find answers to common technical questions, from sample prep through data analysis, about Chromium single cell workflows.

Read key peer-reviewed research publications offering greater insights into biology, enabled by 10x Genomics products and technologies.