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Sequencing Metrics & Base Composition of Chromium Flex Libraries

Sequencing Metrics & Base Composition of Chromium Flex Libraries

  • CG000677_Flex_Gene_Expression_SeqMetrics_BaseComposition_Rev_D.pdf

    Technical Note, CG000677

    CG000677_Flex_Gene_Expression_SeqMetrics_BaseComposition_Rev_D.pdf

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The Chromium Single Cell Gene Expression Flex workflow produces sequencing-ready libraries for measuring RNA. This Technical Note presents a comparison of sequencing metrics for pooled Chromium Fixed RNA Profiling Gene Expression libraries across Illumina platforms. The expected base percentage profiles and Phred quality scores (Q scores) based on a set of control libraries are described to provide general guidance on the expected range of sequencing metrics on Illumina platforms. Individual results may vary depending on the specific sequencing instrument and/or particular sample and loading characteristics.

Document Type
Technical Note

Last Modified
February 5, 2025