All datasets

VERTEBRATE: Zebrafish Sanger AB Tübingen line

De Novo Assembly dataset analyzed using Supernova 2.1.0

Assess data quality
View summary metrics to assess data quality and more.
View summary
Visualize and explore data
Discover differentially expressed genes, visualize your favorite genes, and explore your data with our visualization software.

Learn about Chromium analysis

Tissue extract from a whole zebrafish Sanger AB Tübingen (SAT) line bought to the Zebrafish International Resource Center (ZIRC).

  • Sequencer: NovaSeq
  • Input mass: 0.6 ng
  • Number of reads: 608.18 M
  • Genome size (estimated): 1.68 Gb
  • Raw coverage: 54.23 x
  • Inferred molecule length: 88.61 Kb
  • N50 Contig Length: 19.54 Kb
  • N50 Phase Block: 2.24 Kb
  • N50 Scaffold Length: 3.69 Mb
  • Analysis run with --maxreads=608200000

This dataset is licensed under the Creative Commons Attribution license.