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VERTEBRATE: Zebrafish Sanger AB Tübingen line

De Novo Assembly dataset analyzed using Supernova 2.1.0

Number of samples on this datasets page1

Tissue extract from a whole zebrafish Sanger AB Tübingen (SAT) line bought to the Zebrafish International Resource Center (ZIRC).

  • Sequencer: NovaSeq
  • Input mass: 0.6 ng
  • Number of reads: 608.18 M
  • Genome size (estimated): 1.68 Gb
  • Raw coverage: 54.23 x
  • Inferred molecule length: 88.61 Kb
  • N50 Contig Length: 19.54 Kb
  • N50 Phase Block: 2.24 Kb
  • N50 Scaffold Length: 3.69 Mb
  • Analysis run with --maxreads=608200000

This dataset is licensed under the Creative Commons Attribution 4.0 International (CC BY 4.0) license. 10x citation guidelines available here.

Product

De Novo Assembly

Software

Supernova

Subpipeline

supernova run

10x Instrument(s)

Chromium Controller

Species

Zebrafish

Donor Count

1

Date Published

2018-08-13