Algorithms Overview
Overview of Atera Onboard Analysis Algorithms
New to Atera Onboard Analysis algorithms? Start here for an overview of the algorithms for the Atera Gene Expression product.
Generating the 3D Morphology Image
Image processing algorithms to generate the 3D morphology image.
Decoding Transcripts from RCA Product Images
Image processing and decoding algorithms to generate transcript files and decoding metrics.
Segmenting Nuclei and Cells from 2D Projection Images
Image processing and segmentation algorithms to generate nucleus and cell segmentation files and metrics.
Assigning Transcripts to Cells
Algorithms to generate the cell-feature matrix.
Secondary Analysis and Annotating Cell Types
Secondary analysis and automated cell type annotation algorithms to generate UMAP, cluster, and differential expression files.