All datasets

Aggregate of t_3k and t_4k

Single Cell Gene Expression dataset analyzed using Cell Ranger 1.2.0

Assess data quality
View summary metrics to assess data quality and more.
View summary
Visualize and explore data
Discover differentially expressed genes, visualize your favorite genes, and explore your data with our visualization software.

Learn about Chromium analysis

Aggregate of t_3k and t_4k pan T cells isolated from mononuclear cells of a healthy donor.

  • 8,067 cells detected
  • Cell Ranger commands used to produce this aggregated dataset:

cellranger count --id=t_3k --fastqs=t_3k/fastqs --transcriptome=refdata-cellranger-GRCh38-1.2.0/ --cells=6000 cellranger count --id=t_4k --fastqs=t_4k/fastqs --transcriptome=refdata-cellranger-GRCh38-1.2.0/ --cells=6000 cellranger aggr --id=t_3k_4k_aggregate --csv=t_3k_4k_aggregate.csv

This dataset is licensed under the Creative Commons Attribution license.