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Interpreting Cell Ranger Web Summary Files for Single Cell Gene Expression Assays

Interpreting Cell Ranger Web Summary Files for Single Cell Gene Expression Assays

  • CG000329_TechnicalNote_InterpretingCellRangerWebSummaryFiles_RevA.pdf

    Technical Note, CG000329

    CG000329_TechnicalNote_InterpretingCellRangerWebSummaryFiles_RevA.pdf

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Technical Note - Interpreting Cell Ranger Web Summary Files for Single Cell Gene Expression Assays

The web summary file in the output folder of the Cell Ranger analysis software is the initial point of reference for determining sample performance in Single Cell Gene Expression assays. This Technical Note presents an overview of web summary file interpretation, including the expected metrics and characteristic plots for libraries generated using the Single Cell Gene Expression Solution.

Document Type
Technical Note

Last Modified
May 22, 2020