10x Library

Datasets

30k A549, Lung Carcinoma Cells, Treatments Transduced with a CRISPR Pool, Multiplexed, 6 CMOs – Inputs/Library

30k A549, Lung Carcinoma Cells, Treatments Transduced with a CRISPR Pool, Multiplexed, 6 CMOs – No Treatment

30k A549, Lung Carcinoma Cells, Treatments Transduced with a CRISPR Pool, Multiplexed, 6 CMOs – DZNep

30k A549, Lung Carcinoma Cells, Treatments Transduced with a CRISPR Pool, Multiplexed, 6 CMOs – Trichostatin A

30k A549, Lung Carcinoma Cells, Treatments Transduced with a CRISPR Pool, Multiplexed, 6 CMOs – Valproic Acid

30k A549, Lung Carcinoma Cells, Treatments Transduced with a CRISPR Pool, Multiplexed, 6 CMOs – Kinetin

30k A549, Lung Carcinoma Cells, Treatments Transduced with a CRISPR Pool, Multiplexed, 6 CMOs – Resveratrol

CellPlex Demonstration – DTC (v3.1 Chemistry)

Cell Ranger 6.0.0

30k Sorted DTC Multiplexed, 4 CMOs and Stained with a Panel of TotalSeq B Antibodies – Inputs/Library

30k Sorted DTC Multiplexed, 4 CMOs and Stained with a Panel of TotalSeq B Antibodies – Adenocarcinoma

30k Sorted DTC Multiplexed, 4 CMOs and Stained with a Panel of TotalSeq B Antibodies – NSCLC

30k Sorted DTC Multiplexed, 4 CMOs and Stained with a Panel of TotalSeq B Antibodies – Squamous Cell Carcinoma

30k Sorted DTC Multiplexed, 4 CMOs and Stained with a Panel of TotalSeq B Antibodies – Lung Cancer

CellPlex Demonstration – E18 Mouse Brain Cells (Unstained) (v3.1 Chemistry)

Cell Ranger 6.0.0

5k Mouse E18 Combined Cortex, Hippocampus and Subventricular Zone Cells – Inputs/Library

5k Mouse E18 Combined Cortex, Hippocampus and Subventricular Zone Cells – Brain Cells

CellPlex Demonstration – E18 Mouse Brain Cells (v3.1 Chemistry)

Cell Ranger 6.0.0

30k Mouse E18 Combined Cortex, Hippocampus and Subventricular Zone Cells Multiplexed, 12 CMOs – Inputs/Library

30k Mouse E18 Combined Cortex, Hippocampus and Subventricular Zone Cells Multiplexed, 12 CMOs – Brain 1

30k Mouse E18 Combined Cortex, Hippocampus and Subventricular Zone Cells Multiplexed, 12 CMOs – Brain 2

30k Mouse E18 Combined Cortex, Hippocampus and Subventricular Zone Cells Multiplexed, 12 CMOs – Brain 3

30k Mouse E18 Combined Cortex, Hippocampus and Subventricular Zone Cells Multiplexed, 12 CMOs – Brain 4

CellPlex Demonstration – E18 Mouse Brain Nuclei (Unstained) (v3.1 Chemistry)

Cell Ranger 6.0.0

5k Mouse E18 Combined Cortex, Hippocampus and Subventricular Zone Nuclei – Inputs/Library

5k Mouse E18 Combined Cortex, Hippocampus and Subventricular Zone Nuclei – Brain Nuclei

CellPlex Demonstration – E18 Mouse Brain Nuclei (v3.1 Chemistry)

Cell Ranger 6.0.0

30k Mouse E18 Combined Cortex, Hippocampus and Subventricular Zone Nuclei Multiplexed, 12 CMOs – Inputs/Library

30k Mouse E18 Combined Cortex, Hippocampus and Subventricular Zone Nuclei Multiplexed, 12 CMOs – Brain Nuclei 1

30k Mouse E18 Combined Cortex, Hippocampus and Subventricular Zone Nuclei Multiplexed, 12 CMOs – Brain Nuclei 2

30k Mouse E18 Combined Cortex, Hippocampus and Subventricular Zone Nuclei Multiplexed, 12 CMOs – Brain Nuclei 3

30k Mouse E18 Combined Cortex, Hippocampus and Subventricular Zone Nuclei Multiplexed, 12 CMOs – Brain Nuclei 4

CellPlex Demonstration – Human PBMCs (v3.1 Chemistry)

Cell Ranger 6.0.0

10k Human PBMCs Multiplexed, 2 CMOs – Inputs/Library

10k Human PBMCs Multiplexed, 2 CMOs – Human 1

10k Human PBMCs Multiplexed, 2 CMOs – Human 2

CellPlex Demonstration – Mouse PBMCs (v3.1 Chemistry)

Cell Ranger 6.0.0

10k Mouse PBMCs Multiplexed, 2 CMOs – Inputs/Library

10k Mouse PBMCs Multiplexed, 2 CMOs – Mouse 1

10k Mouse PBMCs Multiplexed, 2 CMOs – Mouse 2

CellPlex Demonstration – Rat PBMCs (v3.1 Chemistry)

Cell Ranger 6.0.0

10k Rat PBMCs Multiplexed, 2 CMOs – Inputs/Library

10k Rat PBMCs Multiplexed, 2 CMOs – Rat 1

10k Rat PBMCs Multiplexed, 2 CMOs – Rat 2

CellPlex Demonstration – Monkey PBMCs (v3.1 Chemistry)

Cell Ranger 6.0.0

10k Monkey PBMCs Multiplexed, 2 CMOs – Inputs/Library

10k Monkey PBMCs Multiplexed, 2 CMOs – Monkey 1

10k Monkey PBMCs Multiplexed, 2 CMOs – Monkey 2

Targeted Neuroscience Demonstration Data (v3 Chemistry)

Cell Ranger 4.0.0

Human Glioblastoma Multiforme: 3’v3 Whole Transcriptome Analysis

Human Glioblastoma Multiforme: 3’v3 Targeted, Neuroscience Panel

Targeted Demonstration (v3.1 Chemistry)

Cell Ranger 4.0.0

PBMCs from a Healthy Donor: Whole Transcriptome Analysis

PBMCs from a Healthy Donor: Targeted, Immunology Panel

PBMCs from a Healthy Donor: Targeted-Compare, Immunology Panel

Hodgkin’s Lymphoma, Dissociated Tumor: Whole Transcriptome Analysis

Hodgkin’s Lymphoma, Dissociated Tumor: Targeted, Gene Signature Panel

Hodgkin’s Lymphoma, Dissociated Tumor: Targeted-Compare, Gene Signature Panel

Hodgkin’s Lymphoma, Dissociated Tumor: Targeted, Immunology Panel

Hodgkin’s Lymphoma, Dissociated Tumor: Targeted-Compare, Immunology Panel

Hodgkin’s Lymphoma, Dissociated Tumor: Targeted, Pan-Cancer Panel

Hodgkin’s Lymphoma, Dissociated Tumor: Targeted-Compare, Pan-Cancer Panel

Single vs Dual Indexing Demonstration (v3.1 Chemistry)

Cell Ranger 4.0.0

10k Peripheral blood mononuclear cells (PBMCs) from a healthy donor, Single Indexed

10k Peripheral blood mononuclear cells (PBMCs) from a healthy donor, Dual Indexed

1k 1:1 Mixture of Human HEK293T and Mouse NIH3T3 Cells, Single Indexed

1k 1:1 Mixture of Human HEK293T and Mouse NIH3T3 Cells, Dual Indexed

10k 1:1 Mixture of Human HEK293T and Mouse NIH3T3 Cells, Single Indexed

10k 1:1 Mixture of Human HEK293T and Mouse NIH3T3 Cells, Dual Indexed

10k Mouse E18 Combined Cortex, Hippocampus and Subventricular Zone Cells, Single Indexed

10k Mouse E18 Combined Cortex, Hippocampus and Subventricular Zone Cells, Dual Indexed

1k Human PBMCs Stained with a Panel of TotalSeq B Antibodies, Single Indexed

1k Human PBMCs Stained with a Panel of TotalSeq B Antibodies, Dual Indexed

10k A375 Cells Transduced with (1) Non-Target and (1) Target sgRNA, Single Indexed

10k A375 Cells Transduced with (1) Non-Target and (1) Target sgRNA, Dual Indexed

Chromium Connect Demonstration (v3.1 Chemistry)

Cell Ranger 3.1.0

Peripheral blood mononuclear cells (PBMCs) from a healthy donor – Chromium Connect (channel 1)

Peripheral blood mononuclear cells (PBMCs) from a healthy donor – Manual (channel 1)

Peripheral blood mononuclear cells (PBMCs) from a healthy donor – Chromium Connect (channel 5)

Peripheral blood mononuclear cells (PBMCs) from a healthy donor – Manual (channel 5)

Aggregate of 8 Chromium Connect channels and 8 manual channels

Chromium Next GEM Demonstration (v3.1 Chemistry)

Cell Ranger 3.1.0

5k Peripheral blood mononuclear cells (PBMCs) from a healthy donor with cell surface proteins (v3 chemistry)

5k Peripheral blood mononuclear cells (PBMCs) from a healthy donor with cell surface proteins (Next GEM)

Cell Ranger 3.0.2

5k Peripheral blood mononuclear cells (PBMCs) from a healthy donor (v3 chemistry)

5k Peripheral blood mononuclear cells (PBMCs) from a healthy donor (Next GEM)

1k 1:1 mixture of fresh frozen human (HEK293T) and mouse (NIH3T3) cells (v3 chemistry)

1k 1:1 mixture of fresh frozen human (HEK293T) and mouse (NIH3T3) cells (Next GEM)

5k 1:1 mixture of fresh frozen human (HEK293T) and mouse (NIH3T3) cells (Next GEM)

10k 1:1 mixture of fresh frozen human (HEK293T) and mouse (NIH3T3) cells (Next GEM)

5k Cells from a combined cortex, hippocampus and subventricular zone of an E18 mouse (v3 chemistry)

5k Cells from a combined cortex, hippocampus and subventricular zone of an E18 mouse (Next GEM)

5k Peripheral blood mononuclear cells (PBMCs) from a healthy donor with cell surface proteins (v3 chemistry)

5k Peripheral blood mononuclear cells (PBMCs) from a healthy donor with cell surface proteins (Next GEM)

Chromium Demonstration (v3 Chemistry)

Cell Ranger 3.0.0

1k PBMCs from a Healthy Donor – Gene Expression and Cell Surface Protein

10k PBMCs from a Healthy Donor – Gene Expression and Cell Surface Protein

10k Cells from a MALT Tumor – Gene Expression and Cell Surface Protein

1k PBMCs from a Healthy Donor (v2 chemistry)

1k PBMCs from a Healthy Donor (v3 chemistry)

10k PBMCs from a Healthy Donor (v3 chemistry)

1k 1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells (v2 chemistry)

1k 1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells (v3 chemistry)

5k 1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells (v3 chemistry)

10k 1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells (v3 chemistry)

1k Brain Cells from an E18 Mouse (v2 chemistry)

1k Brain Cells from an E18 Mouse (v3 chemistry)

10k Brain Cells from an E18 Mouse (v3 chemistry)

1k Heart Cells from an E18 mouse (v2 chemistry)

1k Heart Cells from an E18 mouse (v3 chemistry)

10k Heart Cells from an E18 mouse (v3 chemistry)

Chromium Demonstration (v2 Chemistry)

Cell Ranger 2.1.0

100 1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells

1k 1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells

6k 1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells

12k 1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells

4k PBMCs from a Healthy Donor

8k PBMCs from a Healthy Donor

9k Brain Cells from an E18 Mouse

1k Brain Cells from an E18 Mouse

1k Brain Nuclei from an E18 Mouse

2k Brain Nuclei from an Adult Mouse (>8 weeks)

2k Brain Cells from an E18 Mouse

2k Fixed Brain Cells from an E18 Mouse

2k Fixed (for 6 days at -80ºC) Brain Cells from an E18 Mouse

3k Pan T Cells from a Healthy Donor

4k Pan T Cells from a Healthy Donor

Aggregate of t_3k and t_4k

Cell Ranger 2.0.1

100 1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells

1k Brain Cells from an E18 Mouse

2k Brain Nuclei from an Adult Mouse (>8 weeks)

1k Brain Nuclei from an E18 Mouse

1k 1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells

6k 1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells

12k 1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells

4k PBMCs from a Healthy Donor

8k PBMCs from a Healthy Donor

9k Brain Cells from an E18 Mouse

3k Pan T Cells from a Healthy Donor

4k Pan T Cells from a Healthy Donor

Aggregate of t_3k and t_4k

Cell Ranger 1.3.0

100 1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells

1k 1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells

6k 1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells

12k 1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells

4k PBMCs from a Healthy Donor

8k PBMCs from a Healthy Donor

9k Brain Cells from an E18 Mouse

3k Pan T Cells from a Healthy Donor

4k Pan T Cells from a Healthy Donor

Aggregate of t_3k and t_4k

Cell Ranger 1.2.0

100 1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells

1k 1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells

6k 1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells

12k 1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells

4k PBMCs from a Healthy Donor

8k PBMCs from a Healthy Donor

9k Brain Cells from an E18 Mouse

3k Pan T Cells from a Healthy Donor

4k Pan T Cells from a Healthy Donor

6k PBMCs from a Healthy Donor

1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells

33k PBMCs from a Healthy Donor

3k PBMCs from a Healthy Donor

Cell Ranger 1.0.0

1:1 Mixture of Fresh Frozen Human (HEK293T) and Mouse (NIH3T3) Cells

3k PBMCs from a Healthy Donor

Single Cell 3′ Paper: Zheng et al. 2017

Cell Ranger 1.1.0

CD4+ Helper T Cells

CD34+ Cells

50%:50% Donor B: Donor C PBMC Mixture

ERCC (1k GEMS, 1:10 Dilution)

CD8+ Cytotoxic T cells

AML035 Pre-transplant BMMCs

90%:10% Donor B: Donor C PBMC Mixture

293T Cells

Fresh 68k PBMCs (Donor A)

Jurkat Cells

Frozen BMMCs (Healthy Control 2)

99%:1% Jurkat:293T Cell Mixture

50%:50% Jurkat:293T Cell Mixture

CD8+/CD45RA+ Naive Cytotoxic T Cells

Frozen BMMCs (Healthy Control 1)

293T and 3T3 Cell Mixture

99%:1% Donor B: Donor C PBMC Mixture

AML035 Post-transplant BMMCs

CD14+ Monocytes

Frozen PBMCs (Donor B)

CD56+ Natural Killer Cells

CD4+/CD25+ Regulatory T Cells

Frozen PBMCs (Donor A)

AML027 Post-transplant BMMCs

CD19+ B Cells

AML027 Pre-transplant BMMCs

Frozen PBMCs (Donor C)

CD4+/CD45RA+/CD25- Naive T cells

CD4+/CD45RO+ Memory T Cells

Single Cell Immune Profiling Datasets

V(D)J + 5′ Gene Expression Demonstration (v2 Chemistry)

Cell Ranger 5.0.0

Human B cells from a healthy donor pre-flu vaccination (v2)

Human B cells from a healthy donor post-flu vaccination (v2)

Human B cells from a healthy donor pre- and post- flu vaccination (v2)

Human T cells from a Healthy Donor, 1k cells – multi (v2)

Human B cells from a Healthy Donor, 1k cells – multi (v2)

T cells from BALB/c Mice 1k cells – multi (v2)

B cells from BALB/c Mice 1k cells – multi (v2)

Human PBMC from a Healthy Donor, 10k cells – multi (v2)

Human PBMC from a Healthy Donor, 10k cells (v2)

Cell Ranger 4.0.0

Melanoma Tumor Derived Cells (v1.1)

Melanoma Tumor Derived Cells (v2)

Splenocytes from C57BL/6 mice, 1k cells (v1.1)

Splenocytes from C57BL/6 mice, 1k cells (v2)

Splenocytes from C57BL/6 mice, 10k cells (v2)

Human PBMC from a Healthy Donor, 1k cells (v1.1)

Human PBMC from a Healthy Donor, 1k cells (v2)

Human PBMC from a Healthy Donor, 10k cells (v2)

5′ Targeted Neuroscience Demonstration Data (v1 Chemistry)

Cell Ranger 4.0.0

Human Glioblastoma Multiforme: 5’v1 Whole Transcriptome Analysis

Human Glioblastoma Multiforme: 5’v1 Targeted, Neuroscience Panel

5′ Targeted Demonstration (v2 Chemistry)

Cell Ranger 4.0.0

Melanoma, Dissociated Tumor Cells: Targeted, Human Pan-Cancer Panel

Melanoma, Dissociated Tumor Cells: Targeted, Human Immunology Panel

Melanoma, Dissociated Tumor Cells: Targeted, Human Gene Signature Panel

5′ Targeted Demonstration (v1.1 Chemistry)

Cell Ranger 4.0.0

PBMCs from a Healthy Donor: Whole Transcriptome Analysis

PBMCs from a Healthy Donor: Paired T Cell Receptor

PBMCs from a Healthy Donor: Targeted, Immunology Panel

PBMCs from a Healthy Donor: Targeted-Compare, Immunology Panel

V(D)J + 5′ Gene Expression Next GEM Demonstration (v1.1 Chemistry)

Cell Ranger 3.1.0

Human PBMC – 5′ Cell Surface Protein-Only (v1)

Human PBMC – 5′ Cell Surface Protein-Only (Next GEM v1.1)

PBMCs of a Healthy Donor (v1)

PBMCs of a Healthy Donor (Next GEM v1.1)

PBMCs from C57BL/6 mice (v1)

PBMCs from C57BL/6 mice (Next GEM v1.1)

PBMCs of a Healthy Donor (v1, 150×150)

PBMCs of a Healthy Donor (Next GEM v1.1, 150×150)

PBMCs from C57BL/6 mice (v1, 150×150)

PBMCs from C57BL/6 mice (Next GEM v1.1, 150×150)

Application Note – A New Way of Exploring Immunity

Cell Ranger 3.0.2

CD8+ T cells of Healthy Donor 1

CD8+ T cells of Healthy Donor 2

CD8+ T cells of Healthy Donor 3

CD8+ T cells of Healthy Donor 4

Application Note – Redefining Cellular Phenotyping

Cell Ranger 5.0.0

Sorted PBMCs from a CMV seropositive donor

Unsorted PBMCs from a CMV seropositive donor

Aggregated PBMCs from a CMV seropositive donor

Sorted PBMCs from a CMV seronegative donor

Unsorted PBMCs from a CMV seronegative donor

Aggregated PBMCs from a CMV seronegative donor

Cell Ranger 3.0.2