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Sequencing Metrics & Base Composition of Single Cell Multiome ATAC Libraries

  • CG000373_TechNote_SeqMetrics_MultiomeATACLibrary_RevC.pdf

    Technical Note, CG000373

    CG000373_TechNote_SeqMetrics_MultiomeATACLibrary_RevC.pdf

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The Chromium Next GEM Single Cell Multiome ATAC + Gene Expression workflow produces sequencing-ready Multiome ATAC and Gene Expression libraries from the same single nuclei, enabling simultaneous epigenomic and gene expression profiling. This Technical Note presents a comparison of sequencing metrics for a Single Cell Multiome ATAC library across multiple Illumina®️ platforms. Individual results may vary depending on the specific sequencing instrument and/or particular sample and loading characteristics. As the Multiome Gene Expression library is identical to the Chromium Single Cell 3' Gene Expression (dual index) library, see the Gene Expression Dual Index Library data in the Technical Note–Sequencing Metrics & Base Composition of Single Cell 3' Gene Expression and Feature Barcode Dual Index Libraries (CG000374).

FOR USE WITH:

  • Chromium Next GEM Single Cell Multiome ATAC + Gene Expression Reagent Bundle, 16 rxns PN-1000283, includes:

    • Chromium Next GEM Single Cell Multiome ATAC Kit A, 16 rxns PN-1000280
    • Chromium Next GEM Single Cell Multiome Reagent Kit A, 16 rxns PN-1000232
    • Library Construction Kit, 16 rxns PN-1000190
  • Chromium Next GEM Single Cell Multiome ATAC + Gene Expression Reagent Bundle, 4 rxns PN-1000285, includes:

    • Chromium Next GEM Single Cell Multiome ATAC Kit A, 4 rxns PN-1000281
    • Chromium Next GEM Single Cell Multiome Reagent Kit A, 4 rxns PN-1000236
    • Library Construction Kit B, 4 rxns PN-1000279
  • Chromium Next GEM Chip J Single Cell Kit, 48 rxns PN-1000234

  • Chromium Next GEM Chip J Single Cell Kit, 16 rxns PN-1000230

  • Single Index Kit N Set A, 96 rxns PN-1000212

  • Dual Index Kit TT Set A, 96 rxns PN-1000215

Document Type
Technical Note

Last Modified
May 4, 2021