Visium HD Bioinformatics Bootcamp Session 1_Introduction to Visium HD data analysis with 10x Cloud 2025.02.10

Visium CytAssist

Visium

Compact instrument designed to simplify the Visium workflow by facilitating the transfer of analytes from standard glass slides to Visium slides.

HD Spatial Gene Expression

Gene Expression

Protein co-detection

Whole transcriptome probe-based gene expression assay at single cell scale, compatible with FFPE, Fresh Frozen, and Fixed Frozen tissue sections

Space Ranger

Visium Spatial Gene Expression is a next-generation molecular profiling solution for classifying tissue based on total mRNA. Map the whole transcriptome with morphological context in FFPE or fresh frozen tissues to discover novel insights into normal development, disease pathology, and clinical translational research.

Immunofluorescence protein co-detection

Visium CytAssist Gene and Protein Expression

Map the whole transcriptome within the tissue context

Spatial Gene Expression

Spatial gene expression profiling and imaging data of fresh frozen or FFPE tissues.

Analyze your Visium Spatial data with microscope images.

10x Genomics Cloud Analysis is a platform for data management, analysis, and collaboration to streamline and accelerate the interpretation of data generated from 10x Genomics assays.

Data analysis,
simplified

Cloud Analysis

Chromium

Epigenomic Profiling

Immune Profiling

Chromium Single Cell Gene Expression provides single cell transcriptome 3' gene expression and multiomic capabilities to profile tens of thousands of cells. Explore cellular heterogeneity, novel targets, and biomarkers with combined gene expression, cell surface protein expression, or CRISPR edits in each cell.

Cell Surface Protein

CRISPR Screening

Sample multiplexing

Reveal the full complexity of cellular diversity, cell by cell

Chromium X Series

Advanced system for multiomic analysis of hundreds to millions of cells.

Single Cell Gene Expression

3' gene expression profiling at scale with single cell resolution.

Analyze 10x Genomics data quickly and securely in the cloud.