Visium空间分析

HD 3’ Gene Expression

Next-generation Visium HD technology-powered assay with whole transcriptome coverage to gather broad information from diverse species. 根据Centrillion公司的许可制造

推荐用于空间发现扩展应用的Visium分析

单细胞尺度的分辨率

为什么选择HD 3’基因表达

  • 与广泛物种的新鲜冷冻组织样本兼容

  • 从头发现,包括检测异构体、BCR/TCR和SNV的可行性

Assay specifications

    物种

  • 兼容广泛物种

    兼容样本

  • 新鲜冷冻组织

    多组学功能

  • 3’基因表达

  • 形态学(H&E)

  • 异构体表达(可行)

  • TCR和BCR测序(可行)

    通量选项

    捕获区域大小:6.5 x 6.5 mm

分析组分

每个实验都需要Visium HD玻片、核心试剂和Visium CytAssist仪器。如果您不确定自己需要什么,可按照实验创建工具查找实验所需的物品列表。

Consumables


Index Kit

REAGENT

1000215

Dual Index Kit TT Set A, 96 rxn

Core Slides and Reagents

REAGENT

1000857

Visium HD 3', 6.5 mm, 4 rxns

REAGENT

1000856

Visium HD 3', 6.5 mm, 16 rxns

REAGENT

1000854

Visium HD 3' Reagents - Kit A Small

Starter Kits and Accessories

ACCESSORY

1000857

Visium HD 3', 6.5 mm, 4 rxns

Optional Accessories

ACCESSORY

1000499

Visium CytAssist Reagent Accessory Kit

ACCESSORY

1000886

Visium CytAssist Alignment Aid Kit, 6.5 mm

Compatible Instrument


Visium CytAssist

创建您自己的Visium HD 3’实验

设计适合您的实验

用户指南

测序要求

对最终的基因表达文库进行测序,建议深度为被组织完全覆盖的捕获区域至少产生5.5亿对读数。

查看更多

资源

利用Visium HD 3’开展更深度的空间探索

开始使用Visium HD数据分析和第三方工具

数据分析

Space Ranger Analysis Pipelines image

Space Ranger Analysis Pipelines

Free analysis pipelines that process the input file types to align Visium sequencing data with the tissue image and perform optional cell segmentation.

Loupe Browser image

Loupe Browser

Desktop application for Windows and MacOS that allows you to interactively visualize data.

Cloud Analysis image

Cloud Analysis

Cloud Analysis enables quick and easy access to Cell Ranger pipelines from your web browser.

精选数据集

相关产品

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Probe-based spatial gene expression assay for comprehensive differential gene expression at single cell scale.

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Probe-based spatial gene expression assay utilizing first-generation slide architecture with a large Capture Area option.

Visium v1 3'

3' poly(A) capture-based spatial gene expression assay utilizing first-generation slide architecture. Upgrading to HD 3' is recommended.

Visium Spatial

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