10x Genomics Support/Loupe V(D)J Browser/

Tutorials

Interface and Features

Learn about Loupe V(D)J Browser and get oriented with its interface and features.

Overview
Clonotype Distribution and Sequence
Summary Plots
Exploring Clonotypes
Isotype Switching in B Cells
Comparing Multiple Samples

Integrated Analysis

Analysis of each of the sequenced libraries (5′ Gene Expression, V(D)J, Antibody Capture, and Antigen Capture), alone or in combination with other library types, can be performed using the latest versions of Cell Ranger, Loupe Browser, and Loupe V(D)J Browser.

Integrated V(D)J + 5’ Gene Expression Analysis in Loupe Browser
Integrated V(D)J + 5’ Gene Expression Analysis in Loupe V(D)J Browser
Integrated V(D)J + 5’ Gene Expression + Cell Surface Protein Analysis in Loupe V(D)J Browser

Other Analysis

Characterize Tumor Cells