All datasets

10k Peripheral Blood Mononuclear Cells (PBMCs) from a Healthy Donor

Single Cell ATAC dataset analyzed using Cell Ranger ATAC 1.1.0

Assess data quality
View summary metrics to assess data quality and more.
View summary
Visualize and explore data
Discover differentially expressed genes, visualize your favorite genes, and explore your data with our visualization software.

Learn about Chromium analysis

Peripheral blood mononuclear cells (PBMCs) from a healthy donor.

  • ~15400 transposed nuclei were loaded.
  • 9277 nuclei were recovered.
  • Sequenced on Illumina NovaSeq with approximately 43k read pairs per cell.
    • 50 bp Read 1
    • 8 bp i7 index (sample index)
    • 16 bp i5 (10x Barcode)
    • 49 bp Read 2

This dataset is licensed under the Creative Commons Attribution license.