Xenium Explorer
What is Xenium Explorer?
Explore Xenium In Situ data, from tissue macrostructures to subcellular resolution, with our interactive visualization tool. Pinpoint the locations of specific transcripts, check cell segmentation, and inform downstream analysis.
Tutorials
Check Data Quality
Find tips for examining cell segmentation, cell cluster assignment, and gene expression with Xenium Explorer.
Multiple Selections
Use Xenium Explorer lasso tools to narrow your focus to the cells that matter.
Saving and Sharing
Save UI settings, transfer configurations to another window, and share settings with others.
Image Alignment
Align post-Xenium images or import images aligned with third-party tools.
Post-Xenium Image Format
Convert post-Xenium images to a format compatible with Xenium Explorer.
Q&A
More Q&As for Xenium Explorer are coming soon.
Release Notes
View the latest updates to Xenium Explorer.
Datasets
Access free, publicly available data generated with Xenium In Situ Gene Expression solutions.
Analysis Guides
A collection of introductions, tutorials, and blogs for data analysis beyond 10x Genomics software.
Xenium Onboard Analysis
Learn more about Xenium In Situ instrument analysis software.
Xenium Ranger
Xenium Ranger supports reanalysis of data from Xenium In Situ solutions.