Xenium Ranger

What is Xenium Ranger?

The Xenium In Situ software suite is a set of software applications for analyzing and visualizing in situ gene expression data produced by the Xenium Analyzer. Xenium Ranger provides flexible off-instrument reanalysis of Xenium In Situ data. Relabel transcripts, resegment cells with the latest 10x segmentation algorithms, or import your own segmentation data to assign transcripts to cells.

Download Xenium Ranger

New to Xenium Ranger? Getting Started with Xenium Ranger

Learn about Xenium Ranger, software compatibility, and analysis workflows.

Analysis

Inputs

Learn more about input files required for Xenium Ranger

Running Pipelines

Learn how to run Xenium Ranger subcommands.

Outputs

Learn more about output files generated by Xenium Ranger

Algorithms

View the latest updates to Xenium Ranger algorithms.

Q&A

Browse Q&As from the 10x Genomics support team.

Datasets

Access free, publicly available data generated with Xenium In Situ solutions.

Analysis Guides

A collection of introductions, tutorials, and blogs for data analysis beyond 10x Genomics software.

Xenium Onboard Analysis

Learn more about Xenium In Situ instrument analysis software.

Xenium Explorer

Xenium Explorer supports visualization of data from Xenium In Situ solutions.