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Interpreting Space Ranger Web Summary Files for Visium Spatial Gene Expression for FFPE Assay

Interpreting Space Ranger Web Summary Files for Visium Spatial Gene Expression for FFPE Assay

  • CG000499_TechNote_InterpretingspaceRangerWebSummaryFiles_VisiumFFPE_RevA.pdf

    Technical Note, CG000499

    CG000499_TechNote_InterpretingspaceRangerWebSummaryFiles_VisiumFFPE_RevA.pdf

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The web summary file in the output folder of the Space Ranger analysis software is the initial point of reference for determining sample performance in the Visium Spatial Gene Expression for FFPE assay. This Technical Note presents an overview of web summary file interpretation, including the expected metrics and characteristic plots for libraries generated using the Visium Spatial Gene Expression for FFPE assay.

Document Type
Technical Note

Last Modified
July 21, 2022