Built to deliver exceptional image and data quality
Features state-of-the-art image acquisition and high-resolution optics with a nanometer-level localization precision.
Provides industry-leading throughput, up to 7x faster than other platforms
Generates best-in-class spatially resolved single cell gene expression data, at the fastest speeds per mm2. Analyze up to 236 mm2 per slide and up to 1,400 mm² per week.
Converts terabytes of 3D imaging data into biologically meaningful insights
One-of-a-kind onboard analysis software performs high-powered computation on-instrument. Internal image sensor data is converted into ready-to-explore formats as soon your run finishes.
Delivers an unparalleled user experience
Simple run setup and cleanup operations, an intuitive touchscreen, and ergonomic design make instrument operation a breeze.
Expands with upcoming innovations
Flexible fluidic architecture allows the Xenium Analyzer to leverage new functionalities, assay enhancements, and more.
The ultimate single cell spatial biology experience
Instrument | Xenium Analyzer![]() |
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Dimensions (W x D x H) | 52.5” x 27” x 31” (59” with door open) 133.3 cm x 68.5 cm x 78.7 cm (149.8 cm with door open) |
Resolution | Transcript XY-localization precision < 30 nm and Z-localization precision< 100 nm Pixel size = ~0.2 µm/pixel |
Number of slides per run | 2 slides |
Throughput (area per time) | 400 mm² in less than 50 hours Explore Runtime Planner |
Total tissue area analyzable per run | ~ 470 mm² |
Sample prep | 2–3 days sample prep, under 50 hour run time for 4 cm² of tissue on the Xenium Analyzer |
Data output file formats | Cell-feature matrices: MEX, HDF5, Zarr Transcripts and segmentation boundaries: CSV, Parquet, Zarr Tissue images: OME-TIFF |
Connectivity | Compatible with 10x Genomics Cloud instrument management |
The science behind Xenium
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Xenium In Situ Platform
Building on our years of innovation in single cell and spatial technologies, Xenium was designed to transform the way researchers can characterize RNA, protein, and cells in their native tissue environment.