Xenium Panels

Ready-to-use meets unmatched customization

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Complete flexibility for your research

Ready-to-use RNA panels

Get started quickly with customizable human and mouse panels up to 5,000 genes.

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NEW! Ready-to-use protein subpanels

Streamline your multiomic analyses with validated subpanels for 27 human immune and tumor microenvironment markers.

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Custom RNA panels

Focus on your genes and species of interest with unparalleled customization capabilities.

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Single cell spatial discovery at any scale

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Overview

<500-gene panels

Focused tissue and pathway characterization

5,000-gene panels

Broad discovery in human and mouse

  • Customizable with up to 100 additional genes

  • Explore across tissues, disease areas, and drug targets

Product details

9 tissue- and application-specific panels
See panels and gene lists
2 comprehensive gene panels
See panels and gene lists

Chemistry

RNA v1
Xenium Prime

Panel sizes

50–480 genes
5,000 genes

Panel types

Ready-to-use panels
Custom panels
Ready-to-use panels

Customization

Xenium Panel Designer
Add on up to 100 genes to pre-designed panels
Design fully custom panels up to 480 genes
Xenium Panel Designer
Add on up to 100 genes

Compatible species

Human
Mouse
Additional species with custom panels
Human
Mouse

Compatible samples

FFPE tissue
Fresh frozen tissue
Tissue microarray (TMA)
FFPE tissue
Fresh frozen tissue
Tissue microarray (TMA)

Same-section capabilities

Gene expression
Protein (IF)
Morphology (H&E)
Xenium Protein subpanels
Gene expression
Protein (IF)
Morphology (H&E)

Throughput

2 Xenium slides per run (up to 472 mm² of tissue)
~3 days per run (+2 days with Xenium Protein subpanel add-on)
2 Xenium slides per run (up to 472 mm² of tissue)
2 Xenium slides per run (up to 472 mm² of tissue)
Ready-to-use protein subpanels

Unlock multiomic insights

Reveal functional outcomes of gene expression changes, cross-validate biomarkers, and enhance drug target identification.
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  • Streamlined RNA and protein profiling with a same section, same run workflow

  • Easy to use, pre-optimized, validated protein subpanels

Xenium Protein subpanels | Add on to <500-gene human panels | FFPE tissue compatible

Xenium Protein subpanels are flexibly designed to be run collectively or modularly, enabling comprehensive cell typing and spatial characterization of the immune and tumor microenvironment.

Custom RNA Panels

Ultimate versatility

Target unique gene markers, expression signatures, and cell types.
Design a custom panel

  • Intuitive Custom Panel Designer software for full custom and add-on panels

  • Advanced custom designs for isoforms, SNVs, TCR/BCR, xenografts, and viral/bacterial sequences

1. Start a custom panel design with step-by-step guidance

Add up to 100 genes to a pre-designed panel or build a 480-gene standalone custom panel using the Custom Panel Designer.

2. Optimize assay performance

Review and resolve actionable feedback to refine your panel design.

3. Order and receive panels in 4–6 weeks

Work with your sales representative to order your panels.

4. Experience the power of Xenium In Situ

Explore spatially resolved single cell gene expression maps on the Xenium Analyzer.

Need help choosing?

Speak to a sales specialist