10x Genomics Cloud
Web applications
Cloud Analysis
Analyze 10x Genomics data quickly and securely in the cloud. Currently compatible with Single Cell Gene Expression, Single Cell Immune Profiling, and Single Cell Multiome ATAC + GEX products, and only available in the United States & Canada.
Custom Panel Designer
Build fully custom targeted gene expression panels or customize pre-designed panels.
Data processing pipelines
Command line applications
Cell Ranger
Analyze Single Cell Gene Expression and Single Cell Immune Profiling data with a set of free, easy-to-use analysis pipelines.
Cell Ranger ATAC
Analyze Single Cell ATAC data with a set of free, easy-to-use analysis pipelines for identification of open chromatin regions, motif annotation, and differential accessibility analysis.
Cell Ranger ARC
Analyze Single Cell Multiome ATAC + Gene Expression data with a set of free, easy-to-use pipelines for primary and secondary analyses.
Space Ranger
Analyze your Spatial Gene Expression data with a set of free, easy-to-use analysis pipelines.
Data visualization
Desktop applications
Loupe Browser
Explore 10x Genomics data with our powerful visualization software. Compatible with single cell and spatial products.
Loupe V(D)J Browser
Investigate clonotypes and examine V(D)J transcripts in single cell immune profiling data with this interactive visualization tool. Compatible with Single Cell Immune Profiling.
Xenium Explorer
Explore Xenium In Situ data from the tissue scale down to subcellular resolution with our interactive visualization tool.