Software

10x Genomics builds powerful and user-friendly software to help process and visualize data.

10x Genomics Cloud

Web applications

10x Genomics Cloud Analysis

Cloud Analysis

Analyze 10x Genomics data quickly and securely in the cloud. Currently compatible with Single Cell Gene Expression, Single Cell Immune Profiling, and Single Cell Multiome ATAC + GEX products, and only available in the US, Canada, and Europe.

10x Genomics Xenium Panel Designer

Xenium Panel Designer

Design your custom panel to perform Xenium In Situ Gene Expression analyses. Combine custom targets with pre-designed panels or build a standalone custom panel for maximum flexibility.

Data processing pipelines

Command line applications

10x Genomics Cell Ranger

Cell Ranger

Analyze Single Cell Gene Expression and Single Cell Immune Profiling data with a set of free, easy-to-use analysis pipelines.

10x Genomics Cell Ranger ATAC

Cell Ranger ATAC

Analyze Single Cell ATAC data with a set of free, easy-to-use analysis pipelines for identification of open chromatin regions, motif annotation, and differential accessibility analysis.

10x Genomics Cell Ranger ARC

Cell Ranger ARC

Analyze Single Cell Multiome ATAC + Gene Expression data with a set of free, easy-to-use pipelines for primary and secondary analyses.

Space Ranger

Space Ranger

Analyze your Spatial Gene Expression data with a set of free, easy-to-use analysis pipelines.

Data visualization

Desktop applications

10x Genomics Loupe Browser

Loupe Browser

Explore 10x Genomics data with our powerful visualization software. Compatible with single cell and spatial products.

10x Genomics Cell Ranger ATAC

Loupe V(D)J Browser

Investigate clonotypes and examine V(D)J transcripts in single cell immune profiling data with this interactive visualization tool. Compatible with Single Cell Immune Profiling.

Xenium Explorer

Xenium Explorer

Explore Xenium In Situ data from the tissue scale down to subcellular resolution with our interactive visualization tool.