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Single Cell Gene Expression Demonstrated Protocol Compatibility Table

Single Cell Gene Expression Demonstrated Protocol Compatibility Table

Compatible (tested in-house)
Incompatible
Untested but low risk
Untested, use at your own risk

Protocols
3'
3' with Cell Surface Protein
3' with CRISPR Screening
3' with Sample Multiplexing
Cell Preparation for Single Cell Protocols
Nuclei Isolation from Cell Suspensions & Tissues for Single Cell RNA Sequencing
Cell Thawing Protocols for Single Cell Assays
Removal of Dead Cells from Single Cell Suspensions for Single Cell RNA Sequencing
Tumor Dissociation for Single Cell RNA Sequencing
Enrichment of CD3+ T Cells from Dissociated Tissues for Single Cell RNA Sequencing and Immune Repertoire Profiling
Cell Surface Protein Labeling for Single Cell RNA Sequencing Protocols
Single Cell Suspensions from Cultured Cell Lines for Single Cell RNA Sequencing
Dissociation of Mouse Embryonic Neural Tissue for Single Cell RNA Sequencing
Cell Multiplexing Oligo Labeling for Single Cell RNA Sequencing Protocols
Moss Protoplast Suspension for Single Cell RNA Sequencing
Document Type
Demonstrated Protocol

Last Modified
October 31, 2025