Cell Ranger v7.2 (and later) does not support Targeted Gene Expression analysis. Use Cell Ranger v7.1 to analyze your Targeted Gene Expression libraries.
Future releases of Cell Ranger will not support Low Throughput (LT) libraries.
What is Feature Barcode?
Adding extra layers of information to cells by running Single Cell Gene Expression in parallel with other assays
What is Cell Multiplexing
Processing multiple samples together in a single GEM well
What is Antigen Capture (BEAM)
A comprehensive approach to mapping antigens along with the gene expression and immune repertoire information from the same single cells
What is Fixed RNA Profiling?
Probe based whole transcriptome analysis for samples (single cells or nuclei) fixed with formaldehyde
What is HT?
High throughput, cost-effective solutions for profiling gene expression at the single cell level
What is LT?
Cost-effective solution for smaller-scale and pilot studies for profiling whole transcriptome at the single cell level
Experimental Design for Immune Profiling
Recommendations for designing your V(D)J expreiment