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Xenium Explorer

What is Xenium Explorer?

Explore Xenium In Situ data, from tissue macrostructures to subcellular resolution, with our interactive visualization tool. Pinpoint the locations of specific transcripts, check cell segmentation, and inform downstream analysis.

Download Xenium ExplorerTry Xenium Explorer Demo

New to Xenium Explorer? Getting Started with Xenium Explorer

Walk through Xenium Explorer features for investigating your in situ gene expression data.


Check Data Quality

Find tips for examining cell segmentation, cell cluster assignment, and gene expression with Xenium Explorer.

Multiple Selections

Use Xenium Explorer lasso tools to narrow your focus to the cells that matter.

Saving and Sharing

Save UI settings, transfer configurations to another window, and share settings with others.