NOW SHIPPING
Flex, reimagined
Plate-based multiplexing has transformed Flex, enabling unprecedented scale. And because it’s powered by Chromium automated cell partitioning, superior performance comes standard. The benefits of plates plus Flex:
- Profile up to 384 samples in a 96-well format
- Run partial plates today, save the rest for later
- Streamline sample handling with automation compatibility
Two powerful chemistries to choose from
Need help choosing?
Overview
Flex
Protein coding gene coverage
- Profile up to 384 samples a week with 96-well multiplexing
- Run partial plates: use only the reagents you need, when you need them
- Analyze more sample types, including FFPE and whole blood
Learn more about Flex
Universal (3' / 5')
Whole transcriptome coverage
- Broadest multiomic options and diverse species compatibility
- De novo discovery of isoforms, long non-coding RNA, and more
- Highest cell recovery for low-input samples
Learn more about Universal (3' / 5')
Products
Chemistry
- Probe-based
- Reverse transcription-based
Compatible species
Human
Mouse
Other species with custom probes
- Agnostic
Compatible samples
Cell suspensions
Nuclei suspensions
Flow-sorted cells
Fixed whole blood
Fresh tissue
Frozen tissue
FFPE tissue
PFA-fixed tissue
Organoids
- Cell suspensions
- Nuclei suspensions
- Flow-sorted cells
Fixed human PBMCs- Fresh tissue
- Frozen tissue
DSP/Methanol-fixed- Organoids
Multiomic capabilities
Gene expression
Cell surface protein
Intracellular protein
CRISPR screening
Gene expression
TCR & BCR sequencing
Antigen specificity
Cell surface protein- CRISPR screening
Chromatin accessibility
Cell & sample throughput
Maximum scalability
Singleplex
20K cells/sample
160K cells/chip
Output: 8 samples/chip
Plate-based multiplexing
20K cells/sample
8M cells/chip
Up to 384 samples/channel
Output: 3,072 samples/chip
Great for pilot to mid-scale studies
Singleplex
20K cells/sample
160K cells/chip
Output: 8 samples/chip
On-chip multiplexing
5K cells/sample
40K cells/chip
Up to 4 samples/channel
Output: 8 samples/chip
Hashing
8 channels/chip
60K cells/channel
480K cells/chip
Output: 96+ samples/chip
Reveal the epigenomic landscape, cell by cell
Analyze chromatin accessibility at single cell resolution with our Epi kits, resolving cell types and states using genome-wide epigenetic profiles and gaining a deeper understanding of gene regulatory mechanisms.
Explore open chromatin regions with Assay for Transposase Accessible Chromatin (ATAC-seq) chemistry
Learn about Epi ATAC
Directly link 3’ gene expression and epigenomic profiles from the same nucleus with the Multiome assay
Learn about Epi Multiome
Profile up to 80,000 nuclei (1–8 samples) per chip
Ensure reliable assay performance with an all-in-one isolation kit that requires little to no optimization for most tissues
Learn about the Nuclei Isolation Kit
Compare our most popular Single Cell products
Need help choosing?
