The most versatile single cell toolkit
Flex, reimagined
Plate-based multiplexing has transformed Flex, enabling unprecedented scale. And because it’s powered by Chromium automated cell partitioning, superior performance comes standard. The benefits of plates plus Flex:
Profile up to 384 samples in a 96-well format
Run partial plates today, save the rest for later
Streamline sample handling with automation compatibility
Two powerful chemistries to choose from
Overview
Flex
Protein coding gene coverage
Profile up to 384 samples a week with 96-well multiplexing
Run partial plates: use only the reagents you need, when you need them
Analyze more sample types, including FFPE and whole blood
Universal (3' / 5')
Whole transcriptome coverage
Broadest multiomic options and diverse species compatibility
De novo discovery of isoforms, long non-coding RNA, and more
Highest cell recovery for low-input samples
Products
Chemistry
Probe-based
Reverse transcription-based
Compatible species
Human
Mouse
Other species with custom probes
Agnostic
Compatible samples
Cell suspensions
Nuclei suspensions
Flow-sorted cells
Fixed whole blood
Fresh tissue
Frozen tissue
FFPE tissue
PFA-fixed tissue
Organoids
Cell suspensions
Nuclei suspensions
Flow-sorted cells
Fixed human PBMCs
Fresh tissue
Frozen tissue
DSP/Methanol-fixed
Organoids
Multiomic capabilities
Gene expression
Cell surface protein
Intracellular protein
CRISPR screening
Gene expression
TCR & BCR sequencing
Antigen specificity
Cell surface protein
CRISPR screening
Chromatin accessibility
Cell & sample throughput
Maximum scalability
Singleplex
20K cells/sample
160K cells/chip
Output: 8 samples/chip
Plate-based multiplexing
20K cells/sample
8M cells/chip
Up to 384 samples/channel
Output: 3,072 samples/chip
Great for pilot to mid-scale studies
Singleplex
20K cells/sample
160K cells/chip
Output: 8 samples/chip
On-chip multiplexing
5K cells/sample
40K cells/chip
Output: 8 samples/chip
Hashing
8 channels/chip
60K cells/channel
480K cells/chip
Output: 96+ samples/chip
Reveal the epigenomic landscape, cell by cell
Explore open chromatin regions with Assay for Transposase Accessible Chromatin (ATAC-seq) chemistry
Directly link 3’ gene expression and epigenomic profiles from the same nucleus with the Multiome assay
Profile up to 80,000 nuclei (1–8 samples) per chip
Ensure reliable assay performance with an all-in-one isolation kit that requires little to no optimization for most tissues