Workflow Update for Chromium Next GEM AssaysLearn more
Product support
Chromium
- Universal 3' Gene Expression3' gene expression profiling at scale with single cell resolution.
- Universal 5' Gene Expression5' gene expression alongside V(D)J repertoire profiling and antigen specificity of T and B cells.
- Flex Gene ExpressionFixed RNA Profiling assay for comprehensive probe-based gene expression profiling with single cell resolution.
- Epi Multiome ATAC + Gene ExpressionCombined profiling of 3' gene expression and chromatin accessibility from the same cell.
- Epi ATACChromatin accessibilility profiling at the single cell level.
Visium
- HD 3’ Spatial Gene ExpressionCytAssist EnabledUnbiased whole transcriptome poly-A based gene expression assay at single cell scale, compatible with Fresh Frozen tissue sections
- HD Spatial Gene ExpressionCytAssist EnabledWhole transcriptome probe-based gene expression assay at single cell scale, compatible with FFPE, Fresh Frozen, and Fixed Frozen tissue sections
- CytAssist Spatial Gene ExpressionCytAssist EnabledProbe-based assay allowing simultaneous analysis of molecular and imaging data from FFPE, Fresh Frozen, and Fixed Frozen tissue sections.
- CytAssist Spatial Gene and Protein ExpressionCytAssist EnabledSimultaneous analysis of RNA and protein expression of FFPE tissues, using probe-based chemistry and tagged antibodies.
- Spatial Gene Expression for Fresh FrozenPoly-A based assay allowing simultaneous analysis of molecular and imaging data from fresh frozen tissue sections.
Chromium (discontinued)
Visium (discontinued)
Linked-reads (discontinued)
Instrument support
Chromium
Software support
Cloud AnalysisAnalyze 10x Genomics data quickly and securely in the cloud.
Cell RangerAnalyze single cell gene expression data with a set of free, easy-to-use analysis pipelines.
Cell Ranger ATACAnalyze Epi ATAC data for identification of open chromatin regions, motif annotation, and differential accessibility analysis.
Cell Ranger ARCAnalyze Epi Multiome ATAC + Gene Expression data with a set of free, easy-to-use pipelines for primary and secondary analyses.
Space RangerAnalyze your Visium Spatial data with microscope images.
Loupe BrowserExplore 10x Genomics data with our powerful visualization software. Compatible with single cell and spatial products.
Loupe V(D)J BrowserInvestigate clonotypes and examine V(D)J transcripts in Single Cell Immune Profiling data with this interactive visualization tool.
Xenium ExplorerExplore Xenium In Situ data from the tissue scale down to subcellular resolution with our interactive visualization tool.
Xenium Panel DesignerSubmit custom panel requests in the cloud.
Xenium RangerAnalyze Xenium In Situ Gene Expression data with a set of easy-to-use analysis pipelines.
Xenium Onboard AnalysisDetails about the algorithms and output files generated by the Xenium Onboard Analysis pipeline.